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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_85047 |
| Cell Name : | AA0077 |
| Archive Name : | MouseLight |
| Species Name : | mouse |
| Strain : | C57BL/6 |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites Moderate, Axon Complete |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 6.0 months
|
| Max Age : | 6.0 months
|
| Gender : |
Female
|
| Min Weight : | 25 grams
|
| Max Weight : | 25 grams
|
| Development : | adult |
| Primary Brain Region : | brainstem |
| Secondary Brain Region : | epithalamus |
| Tertiary Brain Region : | Lateral habenula |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | projection |
| Tertiary Cell Class : | Not reported |
| Original Format : | Janelia Workstation-Large Volume Viewer.swc |
| Experiment Protocol : | in vivo |
| Experimental Condition : | Control |
| Staining Method : | enhanced green fluorescent protein |
| Slicing Direction : | coronal |
| Slice Thickness : | 25
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 40x |
| Reconstruction Method : | Janelia Workstation-Large Volume Viewer |
| Date of Deposition : | 2017-11-03 |
| Date of Upload : | 2018-04-16 |
| Persistence Vector : | AA0077.pvec |
| Note : | imaged at ~0.3 x 0.3 x 1 micron resolution with physical overlap in x, y, and z between imaged volumes |
|
|
| Reference Article |
| Related Article Reference : | Long distance projections of cortical pyramidal neurons. |
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| Measurements |
| Soma Surface : |
2.93 μm2 |
| Number of Stems : |
5 |
| Number of Bifurcations : |
146 |
| Number of Branches : |
297 |
| Overall Width : |
2376.49 μm |
| Overall Height : |
5271.06 μm |
| Overall Depth : |
3960.25 μm |
| Average Diameter : |
1 μm |
| Total Length : |
56140.7 μm |
| Total Surface : |
176670 μm2 |
| Total Volume : |
44317 μm3 |
| Max Euclidean Distance : |
4765.43 μm |
| Max Path Distance : |
9233.89 μm |
| Max Branch Order : |
28 |
| Average Contraction : |
0.88 |
| Total Fragmentation : |
2209 |
| Partition Asymmetry : |
0.68 |
| Average Rall's Ratio : |
2 |
| Average Bifurcation Angle Local : |
79.06° |
| Average Bifurcation Angle Remote : |
74.7° |
| Fractal Dimension : |
1.03 |
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