8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_05589
Cell Name :  A6-May-27-IR3-3-E
Archive Name :  Luebke
Species Name :  mouse
Strain :  C57B6/SJL
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  9.0 months
Max Age :  9.0 months
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  layer 3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.asc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  40x
Reconstruction Method :  Neurolucida
Date of Deposition :  2009-08-09
Date of Upload :  2010-02-16
Persistence Vector :  A6-May-27-IR3-3-E.pvec
Note :  Wildtype. When originally released, this reconstruction had been incompletely processed, and this issue was fixed in release 6.1 (May 2015). The pre-6.1 version of the processed file is available for download here.

Reference Article
Related Article Reference :  Structural and functional changes in tau mutant mice neurons are not linked to the presence of NFTs.

Measurements
Soma Surface :  520.33 μm2
Number of Stems :  9
Number of Bifurcations :  66
Number of Branches :  141
Overall Width :  279.05 μm
Overall Height :  321.58 μm
Overall Depth :  117.56 μm
Average Diameter :  1.22 μm
Total Length :  6978.88 μm
Total Surface :  27215.1 μm2
Total Volume :  10686.7 μm3
Max Euclidean Distance :  276.46 μm
Max Path Distance :  347.64 μm
Max Branch Order :  12
Average Contraction :  0.9
Total Fragmentation :  2907
Partition Asymmetry :  0.47
Average Rall's Ratio :  2.12
Average Bifurcation Angle Local :  75.49°
Average Bifurcation Angle Remote :  64.24°
Fractal Dimension :  1.02

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