8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_76004
Cell Name :  A1_CA3
Archive Name :  Hur
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  18.5 days
Max Age :  18.5 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA3
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Neuronstudio.swc
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  Not reported
Slice Thickness :  Not reported
Tissue Shrinkage :  Not reported
Objective Type :  Not reported
Magnification :  20x
Reconstruction Method :  NeuronStudio
Date of Deposition :  2017-06-19
Date of Upload :  2017-11-28
Persistence Vector :  A1_CA3.pvec

Reference Article
Related Article Reference :  Anisotropically organized three-dimensional culture platform for reconstruction of a hippocampal neural network.

Measurements
Soma Surface :  604.76 μm2
Number of Stems :  5
Number of Bifurcations :  44
Number of Branches :  93
Overall Width :  197.59 μm
Overall Height :  313.78 μm
Overall Depth :  32.84 μm
Average Diameter :  0.78 μm
Total Length :  3021.12 μm
Total Surface :  6718.24 μm2
Total Volume :  1608.16 μm3
Max Euclidean Distance :  274.43 μm
Max Path Distance :  306.03 μm
Max Branch Order :  10
Average Contraction :  0.93
Total Fragmentation :  991
Partition Asymmetry :  0.48
Average Rall's Ratio :  1.85
Average Bifurcation Angle Local :  68.07°
Average Bifurcation Angle Remote :  55.32°
Fractal Dimension :  1.02

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website