8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_123441
Cell Name :  A13aCSF_Iba1-Z_5-13
Archive Name :  Morara
Species Name :  mouse
Strain :  C57BL/6J
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 2D, Angles
Min Age :  1.8 months
Max Age :  2.0 months
Gender :  Female
Min Weight :  20 grams
Max Weight :  23 grams
Development :  young adult
Primary Brain Region :  spinal cord
Secondary Brain Region :  L6
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Neuronstudio.swc
Experiment Protocol :  in vitro
Experimental Condition :  Experimental Autoimmune Encephalomyelitis (EAE)
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  10  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  NeuronStudio
Date of Deposition :  2019-08-16
Date of Upload :  2019-12-13
Persistence Vector :  A13aCSF_Iba1-Z_5-13.pvec
Note :  Immunized by subcutaneous injections with 300 ul of 200 ug Myelin Oligodendrocyte Glycoprotein (MOG)35-55 in incomplete Complete Freunds Adjuvant containing 8 mg/ml Mycobacterium tuberculosis. Pertussis toxin (500 ng) injected on day of immunization + two days later (Sardi et al 2014). aCSF osmotically administered by intrathecal catheter. Reconstructions performed at 16 dpi (after 14 days of delivery).

Reference Article
Related Article Reference :  Calcitonin gene-related peptide decreases IL-1beta, IL-6 as well as Ym1, Arg1, CD163 expression in a brain tissue context-dependent manner while amelioratingexperimental autoimmune encephalomyelitis.

Measurements
Soma Surface :  4.93 μm2
Number of Stems :  2
Number of Bifurcations :  2
Number of Branches :  6
Overall Width :  1.26 μm
Overall Height :  12.96 μm
Overall Depth :  3.24 μm
Average Diameter :  0.47 μm
Total Length :  22.89 μm
Total Surface :  43.78 μm2
Total Volume :  9.21 μm3
Max Euclidean Distance :  9.31 μm
Max Path Distance :  11.18 μm
Max Branch Order :  1
Average Contraction :  0.85
Total Fragmentation :  56
Partition Asymmetry :  0
Average Rall's Ratio :  0.38
Average Bifurcation Angle Local :  77.09°
Average Bifurcation Angle Remote :  62.81°
Fractal Dimension :  1.1

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