8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_192013
Cell Name :  6_4_16_Sholl_NC16_2_sample3_sp8_1
Archive Name :  Calderon
Species Name :  mouse
Strain :  NexCre Rad21+/+
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  17.5 days
Max Age :  18.5 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Imaris.ims
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Imaris
Date of Deposition :  2022-06-09
Date of Upload :  2022-07-01
Persistence Vector :  6_4_16_Sholl_NC16_2_sample3_sp8_1.pvec
Note :  This reconstruction was obtained after 14 days of in vitro culture.

Reference Article
Related Article Reference :  Cohesin-dependence of neuronal gene expression relates to chromatin loop length.

Measurements
Soma Surface :  114.29 μm2
Number of Stems :  5
Number of Bifurcations :  54
Number of Branches :  113
Overall Width :  238.84 μm
Overall Height :  425.29 μm
Overall Depth :  4.36 μm
Average Diameter :  1.13 μm
Total Length :  3960.55 μm
Total Surface :  14234.6 μm2
Total Volume :  4385.25 μm3
Max Euclidean Distance :  252.12 μm
Max Path Distance :  299.87 μm
Max Branch Order :  13
Average Contraction :  0.93
Total Fragmentation :  18394
Partition Asymmetry :  0.69
Average Rall's Ratio :  1.96
Average Bifurcation Angle Local :  78.72°
Average Bifurcation Angle Remote :  56.8°
Fractal Dimension :  1.02

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