8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_282720
Cell Name :  66_mod_T_160727_F5M6_loom-dimm_02
Archive Name :  Baier
Species Name :  zebrafish
Strain :  Gal4-s1101tET
Structural Domains :  No Dendrites, Soma, Axon
Physical Integrity :  Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.0 days
Max Age :  7.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  stratum fibrosum
Primary Cell Class :  interneuron
Secondary Cell Class :  looming-detector
Tertiary Cell Class :  Not reported
Original Format :  neuTube.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  photo-activatable green fluorescent protein (pa-GFP)
Slicing Direction :  transverse
Slice Thickness :  0.01  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  20x
Reconstruction Method :  neuTube
Date of Deposition :  2020-11-18
Date of Upload :  2024-04-30
Persistence Vector :  66_mod_T_160727_F5M6_loom-dimm_02.pvec
Note :  This reconstruction belongs to neurons NIN that sends projections to tectum, and stratum.

Reference Article
Related Article Reference :  Retinotectal circuitry of larval zebrafish is adapted to detection and pursuit of prey.

Measurements
Soma Surface :  408.71 μm2
Number of Stems :  1
Number of Bifurcations :  61
Number of Branches :  123
Overall Width :  71.66 μm
Overall Height :  46.2 μm
Overall Depth :  54.03 μm
Average Diameter :  4.38 μm
Total Length :  1310.59 μm
Total Surface :  18540.2 μm2
Total Volume :  21799.3 μm3
Max Euclidean Distance :  58.69 μm
Max Path Distance :  151.96 μm
Max Branch Order :  12
Average Contraction :  0.83
Total Fragmentation :  890
Partition Asymmetry :  0.57
Average Rall's Ratio :  2.01
Average Bifurcation Angle Local :  75.81°
Average Bifurcation Angle Remote :  83.44°
Fractal Dimension :  1.09

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