8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_79475
Cell Name :  632_shrinkage_corrected
Archive Name :  Takeuchi
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Incomplete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  28.0 days
Max Age :  28.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young adult
Primary Brain Region :  brainstem
Secondary Brain Region :  trigeminal nucleus
Tertiary Brain Region :  principal trigeminal nucleus, maxillary subregion
Primary Cell Class :  principal cell
Secondary Cell Class :  glutamatergic
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vivo
Experimental Condition :  Infraorbital nerve cut
Staining Method :  biocytin
Slicing Direction :  horizontal
Slice Thickness :  60  μm
Tissue Shrinkage :  Reported 90% in xy, 50% in z
Not corrected
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Neurolucida
Date of Deposition :  2017-05-09
Date of Upload :  2017-11-28
Persistence Vector :  632_shrinkage_corrected.pvec

Reference Article
Related Article Reference :  Afferent Fiber Remodeling in the Somatosensory Thalamus of Mice as a Neural Basis of Somatotopic Reorganization in the Brain and Ectopic MechanicalHypersensitivity after Peripheral Sensory Nerve Injury.

Measurements
Soma Surface :  7034.69 μm2
Number of Stems :  2
Number of Bifurcations :  584
Number of Branches :  1170
Overall Width :  653 μm
Overall Height :  569.62 μm
Overall Depth :  357.09 μm
Average Diameter :  0.21 μm
Total Length :  31194.2 μm
Total Surface :  21769.9 μm2
Total Volume :  1340.99 μm3
Max Euclidean Distance :  862.43 μm
Max Path Distance :  3340.42 μm
Max Branch Order :  101
Average Contraction :  0.78
Total Fragmentation :  5727
Partition Asymmetry :  0.64
Average Rall's Ratio :  2.03
Average Bifurcation Angle Local :  93.36°
Average Bifurcation Angle Remote :  90.71°
Fractal Dimension :  1.12

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