8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_79476
Cell Name :  619_shrinkage_corrected
Archive Name :  Takeuchi
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  No Dendrites, Soma, Axon
Physical Integrity :  Axon Incomplete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  28.0 days
Max Age :  28.0 days
Gender :  Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young adult
Primary Brain Region :  brainstem
Secondary Brain Region :  trigeminal nucleus
Tertiary Brain Region :  principal trigeminal nucleus, maxillary subregion
Primary Cell Class :  principal cell
Secondary Cell Class :  glutamatergic
Tertiary Cell Class :  Not reported
Original Format :  Neurolucida.dat
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  horizontal
Slice Thickness :  60  μm
Tissue Shrinkage :  Reported 90% in xy, 50% in z
Not corrected
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Neurolucida
Date of Deposition :  2017-05-09
Date of Upload :  2017-11-28
Persistence Vector :  619_shrinkage_corrected.pvec

Reference Article
Related Article Reference :  Afferent Fiber Remodeling in the Somatosensory Thalamus of Mice as a Neural Basis of Somatotopic Reorganization in the Brain and Ectopic MechanicalHypersensitivity after Peripheral Sensory Nerve Injury.

Measurements
Soma Surface :  10.66 μm2
Number of Stems :  1
Number of Bifurcations :  34
Number of Branches :  69
Overall Width :  204.85 μm
Overall Height :  512.36 μm
Overall Depth :  101.68 μm
Average Diameter :  0.19 μm
Total Length :  2627.18 μm
Total Surface :  1535.16 μm2
Total Volume :  71.38 μm3
Max Euclidean Distance :  571.89 μm
Max Path Distance :  1023.83 μm
Max Branch Order :  12
Average Contraction :  0.75
Total Fragmentation :  307
Partition Asymmetry :  0.59
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  86.58°
Average Bifurcation Angle Remote :  75.58°
Fractal Dimension :  1.14

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