Detailed Cell Information: 5HT1A-M-400005

8.6.82 - Released: 2025-05-21 - Content: 275062 cells


	HOME BROWSE SEARCH LITERATURE COVERAGE TERMS OF USE HELP 0 Homepage About What's new? Terms of use Detailed statistics Acknowledgements Submit Data By animal species By brain region By cell types By archive Random cells Neuron Atlas Download cart Metadata Morphometry Keywords OntoSearch API Download cart Summary reporting Literature search Data availability Call for data Data usage Bibliometric reporting Quickstart FAQs Tools & Links Known Issues Contact Us Site Map

Details about selected cell

NeuroMorpho.Org ID :	NMO_38407
Cell Name :	5HT1A-M-400005
Archive Name :	Chiang
Species Name :	drosophila melanogaster
Strain :	5-HT1A-Gal4
Structural Domains :	No Dendrites, No Soma, Axon
Physical Integrity :	Axon Complete
Morphological Attributes :	No Diameter, 3D, Angles
Min Age :	5.0 days
Max Age :	15.0 days
Gender :	Male
Min Weight :	Not reported
Max Weight :	Not reported
Development :	adult
Primary Brain Region :	Right Adult Central Complex
Secondary Brain Region :	Right Protocerebral Bridge
Tertiary Brain Region :	Bordering Right Dorsomedial Protocerebrum
Primary Cell Class :	principal cell
Secondary Cell Class :	Unknown neurotransmitter
Tertiary Cell Class :	Embryo-born
Original Format :	Custom.swc
Experiment Protocol :	in vivo
Experimental Condition :	Control
Staining Method :	green fluorescent protein
Slicing Direction :	whole mount
Slice Thickness :	Not applicable
Tissue Shrinkage :	Not reported
Objective Type :	water
Magnification :	40x
Reconstruction Method :	Custom
Date of Deposition :	2016-07-19
Date of Upload :	2016-09-01
Persistence Vector :	5HT1A-M-400005.pvec
Note :	Brain regions were assigned based on a fly brain atlas, whereas cell types were induced using a machine learning process using available metadata and previous cell type assignments. Details of both are described here.

Reference Article

Related Article Reference :	Connectomics-based analysis of information flow in the Drosophila brain.

Measurements

Soma Surface :	3.14 μm²
Number of Stems :	1
Number of Bifurcations :	28
Number of Branches :	57
Overall Width :	107.29 μm
Overall Height :	108.39 μm
Overall Depth :	52.01 μm
Average Diameter :	1 μm
Total Length :	935.7 μm
Total Surface :	2939.6 μm²
Total Volume :	734.9 μm³
Max Euclidean Distance :	153.67 μm
Max Path Distance :	362.52 μm
Max Branch Order :	9
Average Contraction :	0.77
Total Fragmentation :	230
Partition Asymmetry :	0.52
Average Rall's Ratio :	2
Average Bifurcation Angle Local :	76.77°
Average Bifurcation Angle Remote :	81.49°
Fractal Dimension :	1.21