8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_38387
Cell Name :  5HT1A-M-300015
Archive Name :  Chiang
Species Name :  drosophila melanogaster
Strain :  5-HT1A-Gal4
Structural Domains :  No Dendrites, No Soma, Axon
Physical Integrity :  Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.0 days
Max Age :  15.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  protocerebrum
Secondary Brain Region :  Right Dorsomedial Protocerebrum
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Unknown neurotransmitter
Tertiary Cell Class :  Embryo-born
Original Format :  Custom.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  40x
Reconstruction Method :  Custom
Date of Deposition :  2016-07-19
Date of Upload :  2016-09-01
Persistence Vector :  5HT1A-M-300015.pvec
Note :  Brain regions were assigned based on a fly brain atlas, whereas cell types were induced using a machine learning process using available metadata and previous cell type assignments. Details of both are described here.

Reference Article
Related Article Reference :  Connectomics-based analysis of information flow in the Drosophila brain.

Measurements
Soma Surface :  3.14 μm2
Number of Stems :  1
Number of Bifurcations :  29
Number of Branches :  59
Overall Width :  75.44 μm
Overall Height :  165.62 μm
Overall Depth :  48.02 μm
Average Diameter :  1 μm
Total Length :  1067.5 μm
Total Surface :  3353.65 μm2
Total Volume :  838.41 μm3
Max Euclidean Distance :  182.06 μm
Max Path Distance :  399.77 μm
Max Branch Order :  8
Average Contraction :  0.81
Total Fragmentation :  254
Partition Asymmetry :  0.47
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  89.49°
Average Bifurcation Angle Remote :  82.36°
Fractal Dimension :  1.13

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