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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_296559 |
| Cell Name : | 59129R1dC2_SkeletonTree |
| Archive Name : | Witter |
| Species Name : | rat |
| Strain : | Sprague-Dawley |
| Structural Domains : | Dendrites, Soma, No Axon |
| Physical Integrity : | Dendrites Moderate |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 3.0 months
|
| Max Age : | 6.0 months
|
| Gender : |
Female
|
| Min Weight : | 180 grams
|
| Max Weight : | 245 grams
|
| Development : | adult |
| Primary Brain Region : | entorhinal cortex |
| Secondary Brain Region : | medial |
| Tertiary Brain Region : | dorsal, right, layer 5-6 |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | pyramidal |
| Tertiary Cell Class : | Spiny, glutamatergic |
| Original Format : | Amira.swc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | Alexa Fluor 568 |
| Slicing Direction : | horizontal |
| Slice Thickness : | 400
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 63x |
| Reconstruction Method : | Amira |
| Date of Deposition : | 2025-03-04 |
| Date of Upload : | 2025-03-31 |
| Persistence Vector : | 59129R1dC2_SkeletonTree.pvec |
| Note : | This cell was retrogradely labeled by injection of FastBlue into MEC layer II/III. This reconstruction was obtained from slice 1, corresponding to the following coordinates: Bregma d/v -3.70 to -4.10. The cytoplasmic tracer injections were usually close to the slice surface. |
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| Reference Article |
| Related Article Reference : | Retrosplenial and subicular inputs converge on superficially projecting layer V neurons of medial entorhinal cortex. |
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|
| Measurements |
| Soma Surface : |
151.47 μm2 |
| Number of Stems : |
4 |
| Number of Bifurcations : |
18 |
| Number of Branches : |
40 |
| Overall Width : |
135.99 μm |
| Overall Height : |
187.25 μm |
| Overall Depth : |
74.35 μm |
| Average Diameter : |
0.83 μm |
| Total Length : |
1577.4 μm |
| Total Surface : |
4095.98 μm2 |
| Total Volume : |
875.37 μm3 |
| Max Euclidean Distance : |
147.94 μm |
| Max Path Distance : |
217.87 μm |
| Max Branch Order : |
5 |
| Average Contraction : |
0.89 |
| Total Fragmentation : |
3211 |
| Partition Asymmetry : |
0.47 |
| Average Rall's Ratio : |
1.91 |
| Average Bifurcation Angle Local : |
68.69° |
| Average Bifurcation Angle Remote : |
69.92° |
| Fractal Dimension : |
1.03 |
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