8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_297216
Cell Name :  51-5_S_5_100x_dorsal_CA1_basal_1
Archive Name :  Neigh
Species Name :  rat
Strain :  Wistar
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  122.0 days
Max Age :  125.0 days
Gender :  Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  dorsal, stratum oriens
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  40  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2025-02-21
Date of Upload :  2025-05-19
Persistence Vector :  51-5_S_5_100x_dorsal_CA1_basal_1.pvec

Reference Article
Related Article Reference :  Behavior, synaptic mitochondria, and microglia are differentially impacted by chronic adolescent stress and repeated endotoxin exposure in male and female rats.

Measurements
Soma Surface :  114.45 μm2
Number of Stems :  7
Number of Bifurcations :  43
Number of Branches :  93
Overall Width :  7.97 μm
Overall Height :  63.5 μm
Overall Depth :  41.43 μm
Average Diameter :  0.41 μm
Total Length :  656.32 μm
Total Surface :  850.47 μm2
Total Volume :  100.58 μm3
Max Euclidean Distance :  40.15 μm
Max Path Distance :  75.73 μm
Max Branch Order :  11
Average Contraction :  0.83
Total Fragmentation :  1310
Partition Asymmetry :  0.51
Average Rall's Ratio :  2.23
Average Bifurcation Angle Local :  89.3°
Average Bifurcation Angle Remote :  80.13°
Fractal Dimension :  1.09

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