8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_270371
Cell Name :  5-11_2_D
Archive Name :  Seo
Species Name :  mouse
Strain :  P301S::ApoE3/ApoE3
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  280.0 days
Max Age :  280.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  dentate gyrus
Tertiary Brain Region :  molecular layer
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  in vivo
Experimental Condition :  Microbiota re-colonized mice
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  50  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2023-09-04
Date of Upload :  2023-09-13
Persistence Vector :  5-11_2_D.pvec
Note :  GF mice were colonized with fecal microbiota samples collected from 40 week old Conv-R TE4 mice to create Ex-GF animals.

Reference Article
Related Article Reference :  ApoE isoform- and microbiota-dependent progression of neurodegeneration in a mouse model of tauopathy.

Measurements
Soma Surface :  12.5 μm2
Number of Stems :  1
Number of Bifurcations :  6
Number of Branches :  13
Overall Width :  59.79 μm
Overall Height :  24.83 μm
Overall Depth :  2 μm
Average Diameter :  0.25 μm
Total Length :  154.8 μm
Total Surface :  121.58 μm2
Total Volume :  7.6 μm3
Max Euclidean Distance :  33.93 μm
Max Path Distance :  46.29 μm
Max Branch Order :  4
Average Contraction :  0.85
Total Fragmentation :  437
Partition Asymmetry :  0.5
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  52.69°
Average Bifurcation Angle Remote :  66.44°
Fractal Dimension :  1.08

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