8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_107699
Cell Name :  5-0-25-0-50
Archive Name :  Chadderton
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  2.0 months
Max Age :  3.5 months
Gender :  Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  inferior colliculus, central nucleus
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  neuTube.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  coronal
Slice Thickness :  100  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  63x
Reconstruction Method :  neuTube
Date of Deposition :  2018-11-22
Date of Upload :  2019-04-08
Persistence Vector :  5-0-25-0-50.pvec
Note :  Cells were labeled by viral transfection using post-mGRASP (AAV-CAG-post-mGRASP-2A-dTomato)

Reference Article
Related Article Reference :  Combining mGRASP and Optogenetics Enables High-Resolution Functional Mapping of Descending Cortical Projections.

Measurements
Soma Surface :  659.28 μm2
Number of Stems :  6
Number of Bifurcations :  5
Number of Branches :  16
Overall Width :  84.44 μm
Overall Height :  214.03 μm
Overall Depth :  27.84 μm
Average Diameter :  1.13 μm
Total Length :  694.44 μm
Total Surface :  2591.86 μm2
Total Volume :  850.6 μm3
Max Euclidean Distance :  133.21 μm
Max Path Distance :  142.71 μm
Max Branch Order :  4
Average Contraction :  0.9
Total Fragmentation :  452
Partition Asymmetry :  0.6
Average Rall's Ratio :  2.03
Average Bifurcation Angle Local :  99.39°
Average Bifurcation Angle Remote :  74.87°
Fractal Dimension :  1.03

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