8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_192031
Cell Name :  4_4_16_Sholl_NC16_2_sample1_sp8_2
Archive Name :  Calderon
Species Name :  mouse
Strain :  NexCre Rad21+/+
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  17.5 days
Max Age :  18.5 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Imaris.ims
Experiment Protocol :  culture
Experimental Condition :  Control
Staining Method :  immunostaining
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Imaris
Date of Deposition :  2022-06-09
Date of Upload :  2022-07-01
Persistence Vector :  4_4_16_Sholl_NC16_2_sample1_sp8_2.pvec
Note :  This reconstruction was obtained after 14 days of in vitro culture.

Reference Article
Related Article Reference :  Cohesin-dependence of neuronal gene expression relates to chromatin loop length.

Measurements
Soma Surface :  218.77 μm2
Number of Stems :  8
Number of Bifurcations :  37
Number of Branches :  82
Overall Width :  263.75 μm
Overall Height :  338.76 μm
Overall Depth :  9.29 μm
Average Diameter :  1.04 μm
Total Length :  3905.07 μm
Total Surface :  12875.1 μm2
Total Volume :  3621.15 μm3
Max Euclidean Distance :  243.05 μm
Max Path Distance :  262.13 μm
Max Branch Order :  7
Average Contraction :  0.91
Total Fragmentation :  17964
Partition Asymmetry :  0.48
Average Rall's Ratio :  1.88
Average Bifurcation Angle Local :  74.95°
Average Bifurcation Angle Remote :  47.3°
Fractal Dimension :  1.03

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