8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_122273
Cell Name :  46A_scaled
Archive Name :  Uusisaari
Species Name :  mouse
Strain :  C3H/PDX1-cre het or WT and ICR WT
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  2.5 months
Max Age :  3.5 months
Gender :  Male/Female
Min Weight :  25 grams
Max Weight :  45 grams
Development :  young adult
Primary Brain Region :  myelencephalon
Secondary Brain Region :  inferior olive
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Vaa3D.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  Sagittal
Slice Thickness :  150  μm
Tissue Shrinkage :  Reported 66% in z
Corrected (no values given)
Objective Type :  oil
Magnification :  40x
Reconstruction Method :  Vaa3D
Date of Deposition :  2019-06-10
Date of Upload :  2019-12-13
Persistence Vector :  46A_scaled.pvec
Note :  cre-dependent fluorophore-expressing virus mixed with a highly diluted cre-expression virus. mCherry or TdTomato also used instead of GFP

Reference Article
Related Article Reference :  Variability and directionality of inferior olive neuron dendrites revealed by detailed 3D characterization of an extensive morphological library.

Measurements
Soma Surface :  550.99 μm2
Number of Stems :  5
Number of Bifurcations :  4
Number of Branches :  13
Overall Width :  121.25 μm
Overall Height :  195.69 μm
Overall Depth :  43.96 μm
Average Diameter :  2.39 μm
Total Length :  1351.29 μm
Total Surface :  10203.9 μm2
Total Volume :  6877.43 μm3
Max Euclidean Distance :  222.78 μm
Max Path Distance :  318.59 μm
Max Branch Order :  2
Average Contraction :  0.8
Total Fragmentation :  1705
Partition Asymmetry :  0
Average Rall's Ratio :  1.67
Average Bifurcation Angle Local :  70.76°
Average Bifurcation Angle Remote :  64.34°
Fractal Dimension :  1.05

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