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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_284058 |
| Cell Name : | 40x_Ms669_40HzFlicker_1h_IBA1_20 |
| Archive Name : | Prichard_Singer |
| Species Name : | mouse |
| Strain : | C57BL/6J |
| Structural Domains : | Processes, Soma |
| Physical Integrity : | Processes Complete |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 2.0 months
|
| Max Age : | 3.0 months
|
| Gender : |
Male
|
| Min Weight : | 30 grams
|
| Max Weight : | 30 grams
|
| Development : | adult |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | occipital |
| Tertiary Brain Region : | primary visual, right |
| Primary Cell Class : | Glia |
| Secondary Cell Class : | microglia |
| Tertiary Cell Class : | Iba1-positive |
| Original Format : | Imaris.ims |
| Experiment Protocol : | in vitro |
| Experimental Condition : | visual flicker |
| Staining Method : | immunostaining |
| Slicing Direction : | Sagittal |
| Slice Thickness : | 40
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 20x , 40x |
| Reconstruction Method : | Imaris |
| Date of Deposition : | 2023-07-28 |
| Date of Upload : | 2024-07-30 |
| Persistence Vector : | 40x_Ms669_40HzFlicker_1h_IBA1_20.pvec |
| Note : | Animals were exposed to LED lights flashing at 40 Hz frequency (50% duty cycle: 12.5-ms light on and 12.5-ms light off), for 1 hour. |
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| Reference Article |
| Related Article Reference : | Brain rhythms control microglial response and cytokine expression via NF-κB signaling. |
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| Measurements |
| Soma Surface : |
183.49 μm2 |
| Number of Stems : |
4 |
| Number of Bifurcations : |
9 |
| Number of Branches : |
22 |
| Overall Width : |
11.62 μm |
| Overall Height : |
37.17 μm |
| Overall Depth : |
30.52 μm |
| Average Diameter : |
1.4 μm |
| Total Length : |
157.92 μm |
| Total Surface : |
698.76 μm2 |
| Total Volume : |
277.47 μm3 |
| Max Euclidean Distance : |
26.88 μm |
| Max Path Distance : |
42.5 μm |
| Max Branch Order : |
5 |
| Average Contraction : |
0.87 |
| Total Fragmentation : |
868 |
| Partition Asymmetry : |
0.51 |
| Average Rall's Ratio : |
2.02 |
| Average Bifurcation Angle Local : |
31.03° |
| Average Bifurcation Angle Remote : |
75.26° |
| Fractal Dimension : |
1.05 |
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