8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_282390
Cell Name :  3DDS_2_VK
Archive Name :  Kyrargyri_Attwell
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Processes, Soma
Physical Integrity :  Processes Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  90.0 days
Max Age :  90.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  Glia
Secondary Cell Class :  microglia
Tertiary Cell Class :  Iba1-positive
Original Format :  Vaa3D.swc
Experiment Protocol :  in vitro
Experimental Condition :  P2Y13 knockout
Staining Method :  immunostaining
Slicing Direction :  horizontal
Slice Thickness :  75  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  63x
Reconstruction Method :  Vaa3D
Date of Deposition :  2020-08-18
Date of Upload :  2024-03-28
Persistence Vector :  3DDS_2_VK.pvec
Note :  This reconstruction was obtained from CA1-CA2 regions, specifically from strata radiatum and lacunosum moleculare.

Reference Article
Related Article Reference :  P2Y13 receptors regulate microglial morphology, surveillance, and resting levels of interleukin 1β release.

Measurements
Soma Surface :  405.07 μm2
Number of Stems :  10
Number of Bifurcations :  42
Number of Branches :  94
Overall Width :  77.64 μm
Overall Height :  43.5 μm
Overall Depth :  28.58 μm
Average Diameter :  0.53 μm
Total Length :  1035.77 μm
Total Surface :  2116.66 μm2
Total Volume :  448.39 μm3
Max Euclidean Distance :  47.18 μm
Max Path Distance :  65.96 μm
Max Branch Order :  8
Average Contraction :  0.83
Total Fragmentation :  826
Partition Asymmetry :  0.53
Average Rall's Ratio :  1.9
Average Bifurcation Angle Local :  55.31°
Average Bifurcation Angle Remote :  74.94°
Fractal Dimension :  1.08

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