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Details about selected cell |
NeuroMorpho.Org ID : | NMO_122226 |
Cell Name : | 39A_scaled |
Archive Name : | Uusisaari |
Species Name : | mouse |
Strain : | C57BL/6 |
Structural Domains : | Dendrites, Soma, No Axon |
Physical Integrity : | Dendrites Complete |
Morphological Attributes : | Diameter, 3D, Angles |
Min Age : | 28.0 days
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Max Age : | 56.0 days
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Gender : |
Male/Female
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Min Weight : | Not reported
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Max Weight : | Not reported
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Development : | young |
Primary Brain Region : | myelencephalon |
Secondary Brain Region : | inferior olive |
Tertiary Brain Region : | Not reported |
Primary Cell Class : | principal cell |
Secondary Cell Class : | Not reported |
Tertiary Cell Class : | Not reported |
Original Format : | Vaa3D.swc |
Experiment Protocol : | in vitro |
Experimental Condition : | Control |
Staining Method : | Biocytin + Alexa 594 |
Slicing Direction : | Sagittal |
Slice Thickness : | 300
μm |
Tissue Shrinkage : |
Reported 66% in z
Corrected (no values given)
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Objective Type : | oil |
Magnification : | 40x |
Reconstruction Method : | Vaa3D |
Date of Deposition : | 2019-06-10 |
Date of Upload : | 2019-12-13 |
Persistence Vector : | 39A_scaled.pvec |
Note : | Alexa-594 was streptavidin-conjugated |
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Reference Article |
Related Article Reference : | Variability and directionality of inferior olive neuron dendrites revealed by detailed 3D characterization of an extensive morphological library. |
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Measurements |
Soma Surface : |
2195.36 μm2 |
Number of Stems : |
7 |
Number of Bifurcations : |
7 |
Number of Branches : |
21 |
Overall Width : |
58.03 μm |
Overall Height : |
183.35 μm |
Overall Depth : |
37.17 μm |
Average Diameter : |
1.71 μm |
Total Length : |
1895.04 μm |
Total Surface : |
10070.5 μm2 |
Total Volume : |
4951.6 μm3 |
Max Euclidean Distance : |
120.07 μm |
Max Path Distance : |
259.79 μm |
Max Branch Order : |
3 |
Average Contraction : |
0.6 |
Total Fragmentation : |
3691 |
Partition Asymmetry : |
0.19 |
Average Rall's Ratio : |
1.92 |
Average Bifurcation Angle Local : |
70.98° |
Average Bifurcation Angle Remote : |
103.64° |
Fractal Dimension : |
1.15 |
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