8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_122226
Cell Name :  39A_scaled
Archive Name :  Uusisaari
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  28.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young
Primary Brain Region :  myelencephalon
Secondary Brain Region :  inferior olive
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  Vaa3D.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  Biocytin + Alexa 594
Slicing Direction :  Sagittal
Slice Thickness :  300  μm
Tissue Shrinkage :  Reported 66% in z
Corrected (no values given)
Objective Type :  oil
Magnification :  40x
Reconstruction Method :  Vaa3D
Date of Deposition :  2019-06-10
Date of Upload :  2019-12-13
Persistence Vector :  39A_scaled.pvec
Note :  Alexa-594 was streptavidin-conjugated

Reference Article
Related Article Reference :  Variability and directionality of inferior olive neuron dendrites revealed by detailed 3D characterization of an extensive morphological library.

Measurements
Soma Surface :  2195.36 μm2
Number of Stems :  7
Number of Bifurcations :  7
Number of Branches :  21
Overall Width :  58.03 μm
Overall Height :  183.35 μm
Overall Depth :  37.17 μm
Average Diameter :  1.71 μm
Total Length :  1895.04 μm
Total Surface :  10070.5 μm2
Total Volume :  4951.6 μm3
Max Euclidean Distance :  120.07 μm
Max Path Distance :  259.79 μm
Max Branch Order :  3
Average Contraction :  0.6
Total Fragmentation :  3691
Partition Asymmetry :  0.19
Average Rall's Ratio :  1.92
Average Bifurcation Angle Local :  70.98°
Average Bifurcation Angle Remote :  103.64°
Fractal Dimension :  1.15

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