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Details about selected cell |
NeuroMorpho.Org ID : | NMO_108681 |
Cell Name : | 3817_CPi_PHAL_Z001_app2_split_2 |
Archive Name : | Dong |
Species Name : | mouse |
Strain : | zQ175 heterozygous |
Structural Domains : | Dendrites, Soma, No Axon |
Physical Integrity : | Dendrites Complete |
Morphological Attributes : | Diameter, 3D, Angles |
Min Age : | 6.0 months
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Max Age : | 6.0 months
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Gender : |
Male
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Min Weight : | 29 grams
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Max Weight : | 29 grams
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Development : | adult |
Primary Brain Region : | basal ganglia |
Secondary Brain Region : | striatum |
Tertiary Brain Region : | Not reported |
Primary Cell Class : | principal cell |
Secondary Cell Class : | medium spiny |
Tertiary Cell Class : | D2-type dopamine receptor-expressing |
Original Format : | Vaa3D.swc |
Experiment Protocol : | in vivo |
Experimental Condition : | Control |
Staining Method : | Not reported |
Slicing Direction : | coronal |
Slice Thickness : | 1000
μm |
Tissue Shrinkage : |
Not reported
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Objective Type : | water |
Magnification : | 25x |
Reconstruction Method : | Vaa3D |
Date of Deposition : | 2019-04-04 |
Date of Upload : | 2019-08-19 |
Persistence Vector : | 3817_CPi_PHAL_Z001_app2_split_2.pvec |
Note : | Processed with G-Cut |
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Reference Article |
Related Article Reference : | Precise segmentation of densely interweaving neuron clusters using G-Cut. |
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Measurements |
Soma Surface : |
50.67 μm2 |
Number of Stems : |
3 |
Number of Bifurcations : |
32 |
Number of Branches : |
67 |
Overall Width : |
101.77 μm |
Overall Height : |
155.77 μm |
Overall Depth : |
42.38 μm |
Average Diameter : |
1.84 μm |
Total Length : |
2452.58 μm |
Total Surface : |
12112.8 μm2 |
Total Volume : |
8283.07 μm3 |
Max Euclidean Distance : |
129.75 μm |
Max Path Distance : |
170.34 μm |
Max Branch Order : |
8 |
Average Contraction : |
0.87 |
Total Fragmentation : |
572 |
Partition Asymmetry : |
0.48 |
Average Rall's Ratio : |
1.84 |
Average Bifurcation Angle Local : |
85.79° |
Average Bifurcation Angle Remote : |
78.59° |
Fractal Dimension : |
1.05 |
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