8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_168194
Cell Name :  301_J1b
Archive Name :  Zorrilla_Bacci
Species Name :  mouse
Strain :  B6EiC3Sn BLiA-Ts(1716)65Dn/DnJ
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  18.0 days
Max Age :  25.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young adult
Primary Brain Region :  neocortex
Secondary Brain Region :  medial prefrontal
Tertiary Brain Region :  layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  glutamatergic
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Down Syndrome trisomic
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  60x
Reconstruction Method :  Neurolucida
Date of Deposition :  2021-08-30
Date of Upload :  2021-11-17
Persistence Vector :  301_J1b.pvec
Note :  This reconstruction was obtained from a crossed mouse (Ts65Dn Jax stock #5252 crossed with X98GFP Jackson #6340).

Reference Article
Related Article Reference :  Alterations of specific cortical GABAergic circuits underlie abnormal network activity in a mouse model of Down syndrome.

Measurements
Soma Surface :  508.65 μm2
Number of Stems :  7
Number of Bifurcations :  21
Number of Branches :  49
Overall Width :  162.46 μm
Overall Height :  294.38 μm
Overall Depth :  66.45 μm
Average Diameter :  1.13 μm
Total Length :  2831.54 μm
Total Surface :  10052 μm2
Total Volume :  2839.68 μm3
Max Euclidean Distance :  208.04 μm
Max Path Distance :  291.87 μm
Max Branch Order :  4
Average Contraction :  0.78
Total Fragmentation :  1415
Partition Asymmetry :  0.28
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  84.84°
Average Bifurcation Angle Remote :  49.01°
Fractal Dimension :  1.05

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