8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_168216
Cell Name :  301_J1a
Archive Name :  Zorrilla_Bacci
Species Name :  mouse
Strain :  B6EiC3Sn BLiA-Ts(1716)65Dn/DnJ
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Moderate
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  18.0 days
Max Age :  25.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young adult
Primary Brain Region :  neocortex
Secondary Brain Region :  medial prefrontal
Tertiary Brain Region :  layer 2-3
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  glutamatergic
Original Format :  Neurolucida.dat
Experiment Protocol :  in vitro
Experimental Condition :  Down Syndrome trisomic
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  60x
Reconstruction Method :  Neurolucida
Date of Deposition :  2021-08-30
Date of Upload :  2021-11-17
Persistence Vector :  301_J1a.pvec
Note :  This reconstruction was obtained from a crossed mouse (Ts65Dn Jax stock #5252 crossed with X98GFP Jackson #6340).

Reference Article
Related Article Reference :  Alterations of specific cortical GABAergic circuits underlie abnormal network activity in a mouse model of Down syndrome.

Measurements
Soma Surface :  754.94 μm2
Number of Stems :  6
Number of Bifurcations :  24
Number of Branches :  54
Overall Width :  255.77 μm
Overall Height :  271.17 μm
Overall Depth :  103.13 μm
Average Diameter :  1.05 μm
Total Length :  3483.85 μm
Total Surface :  11534.4 μm2
Total Volume :  3093.96 μm3
Max Euclidean Distance :  226.27 μm
Max Path Distance :  315.11 μm
Max Branch Order :  8
Average Contraction :  0.78
Total Fragmentation :  1449
Partition Asymmetry :  0.54
Average Rall's Ratio :  1.96
Average Bifurcation Angle Local :  97.35°
Average Bifurcation Angle Remote :  65.42°
Fractal Dimension :  1.05

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website