8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_141200
Cell Name :  3--OTC-CsA-NPY-9-weeks-20x
Archive Name :  Michaelson
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Dendrites, No Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  14.0 days
Max Age :  14.0 days
Gender :  Male
Min Weight :  Not reported
Max Weight :  Not reported
Development :  young adult
Primary Brain Region :  amygdala
Secondary Brain Region :  basolateral amygdala complex
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  culture
Experimental Condition :  Cyclosporine A (CsA) and Neuropeptide Y (NPY)
Staining Method :  Neurobiotin
Slicing Direction :  coronal
Slice Thickness :  350  μm
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  20x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2020-07-08
Date of Upload :  2020-10-08
Persistence Vector :  3--OTC-CsA-NPY-9-weeks-20x.pvec
Note :  Reconstructions are from organotypic cultures from 2 weeks old rat and viable to at least 8weeks in culture, the equivalent postnatal (EP) age of 8-10 weeks. Culture was incubated with NPY (10 nM) together with CsA (2 mM).

Reference Article
Related Article Reference :  Contribution of NPY Y5 Receptors to the Reversible Structural Remodeling of Basolateral Amygdala Dendrites in Male Rats Associated with NPY-Mediated Stress Resilience.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  35
Number of Branches :  71
Overall Width :  282.88 μm
Overall Height :  432.36 μm
Overall Depth :  10.06 μm
Average Diameter :  0.25 μm
Total Length :  3471.64 μm
Total Surface :  2726.62 μm2
Total Volume :  170.41 μm3
Max Euclidean Distance :  278.73 μm
Max Path Distance :  728.12 μm
Max Branch Order :  20
Average Contraction :  0.86
Total Fragmentation :  3599
Partition Asymmetry :  0.73
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  73.59°
Average Bifurcation Angle Remote :  90.77°
Fractal Dimension :  1.06

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