8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_280653
Cell Name :  2_198
Archive Name :  Celdran
Species Name :  rat
Strain :  Sprague-Dawley
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  No Diameter, 2D, Angles
Min Age :  16.0 days
Max Age :  19.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  embryonic
Primary Brain Region :  neocortex
Secondary Brain Region :  Not reported
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  embryonic stem cell (ESC)-derived
Tertiary Cell Class :  Not reported
Original Format :  NeuronJ.ndf
Experiment Protocol :  culture
Experimental Condition :  pAAV-Syn-CHrimsonR-tdT expression
Staining Method :  td Tomato fluorescent protein
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  40x , 63x
Reconstruction Method :  NeuronJ
Date of Deposition :  2023-09-08
Date of Upload :  2024-03-14
Persistence Vector :  2_198.pvec
Note :  Cells in Neurobasal medium were seeded and incubated in 24-well plates between 21-28 days in vitro (DIV) before transfecting.

Reference Article
Related Article Reference :  Assessment of Different Niosome Formulations for Optogenetic Applications: Morphological and Electrophysiological Effects.

Measurements
Soma Surface :  4572.42 μm2
Number of Stems :  7
Number of Bifurcations :  19
Number of Branches :  45
Overall Width :  466.53 μm
Overall Height :  351.4 μm
Overall Depth :  0 μm
Average Diameter :  1 μm
Total Length :  1595.4 μm
Total Surface :  5012.09 μm2
Total Volume :  1253.02 μm3
Max Euclidean Distance :  452.71 μm
Max Path Distance :  891.87 μm
Max Branch Order :  9
Average Contraction :  0.94
Total Fragmentation :  286
Partition Asymmetry :  0.77
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  80.37°
Average Bifurcation Angle Remote :  82.1°
Fractal Dimension :  1.03

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