8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_106304
Cell Name :  2_180107_mnx1_mKO2CX_taken160808
Archive Name :  Morsch
Species Name :  zebrafish
Strain :  mnx1:Gal4; UAS:H2B-Cerulean-p2a-mKO2-CAAX, mnx1:eGFP-hTDP43wt
Structural Domains :  Neurites, No Soma
Physical Integrity :  Neurites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  3.0 days
Max Age :  3.0 days
Gender :  Not reported
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  spinal cord
Secondary Brain Region :  ventral
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Motoneuron
Tertiary Cell Class :  mnx1 expressing
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  in vivo
Experimental Condition :  hTDP-43 (wt) expression
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  63x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2019-01-09
Date of Upload :  2019-04-08
Persistence Vector :  2_180107_mnx1_mKO2CX_taken160808.pvec

Reference Article
Related Article Reference :  Nucleo-cytoplasmic transport of TDP-43 studied in real time: impaired microglia function leads to axonal spreading of TDP-43 in degenerating motor neurons.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  92
Number of Branches :  186
Overall Width :  111.38 μm
Overall Height :  90.78 μm
Overall Depth :  47.29 μm
Average Diameter :  0.25 μm
Total Length :  1299.68 μm
Total Surface :  1020.77 μm2
Total Volume :  63.8 μm3
Max Euclidean Distance :  115.62 μm
Max Path Distance :  175.36 μm
Max Branch Order :  19
Average Contraction :  0.83
Total Fragmentation :  3982
Partition Asymmetry :  0.55
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  49.49°
Average Bifurcation Angle Remote :  89.1°
Fractal Dimension :  1.1

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