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Details about selected cell |
NeuroMorpho.Org ID : | NMO_77463 |
Cell Name : | 242_Cyst2_2 |
Archive Name : | Koshy |
Species Name : | mouse |
Strain : | B6.Cg-Gt(ROSA)26Sortm6(CAG-ZsGreen1)Hze/J (JAX# 007906) |
Structural Domains : | Dendrites, No Soma, No Axon |
Physical Integrity : | Dendrites Moderate |
Morphological Attributes : | Diameter, 3D, Angles |
Min Age : | 1.5 months
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Max Age : | 3.0 months
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Gender : |
Male/Female
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Min Weight : | Not reported
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Max Weight : | Not reported
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Development : | adult |
Primary Brain Region : | basal ganglia |
Secondary Brain Region : | striatum |
Tertiary Brain Region : | Not reported |
Primary Cell Class : | principal cell |
Secondary Cell Class : | Not reported |
Tertiary Cell Class : | Not reported |
Original Format : | Imaris.ims |
Experiment Protocol : | in vivo |
Experimental Condition : | Toxoplasma gondii infection |
Staining Method : | Not reported |
Slicing Direction : | coronal |
Slice Thickness : | 200
μm |
Tissue Shrinkage : |
Not reported
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Objective Type : | oil |
Magnification : | 40x |
Reconstruction Method : | Imaris |
Date of Deposition : | 2017-04-11 |
Date of Upload : | 2017-11-28 |
Persistence Vector : | 242_Cyst2_2.pvec |
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Reference Articles |
Primary Article Reference : | Neurons are the Primary Target Cell for the Brain-Tropic Intracellular Parasite Toxoplasma gondii. |
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Secondary Article Reference : | 3-D imaging and analysis of neurons infected in vivo with Toxoplasma gondii. |
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Measurements |
Soma Surface : |
N/A |
Number of Stems : |
2 |
Number of Bifurcations : |
11 |
Number of Branches : |
24 |
Overall Width : |
42.42 μm |
Overall Height : |
65.19 μm |
Overall Depth : |
38.48 μm |
Average Diameter : |
1.33 μm |
Total Length : |
365.16 μm |
Total Surface : |
1592.52 μm2 |
Total Volume : |
840.06 μm3 |
Max Euclidean Distance : |
77.46 μm |
Max Path Distance : |
108.33 μm |
Max Branch Order : |
8 |
Average Contraction : |
0.84 |
Total Fragmentation : |
1461 |
Partition Asymmetry : |
0.66 |
Average Rall's Ratio : |
1.95 |
Average Bifurcation Angle Local : |
100.35° |
Average Bifurcation Angle Remote : |
80.77° |
Fractal Dimension : |
1.06 |
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