8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_195060
Cell Name :  210708-ipsi-03_25
Archive Name :  Lee_CJ
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Processes, No Soma
Physical Integrity :  Processes Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  4.0 months
Max Age :  4.0 months
Gender :  Male
Min Weight :  25 grams
Max Weight :  25 grams
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  stratum radiatum
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Imaris.ims
Experiment Protocol :  in vitro
Experimental Condition :  Traumatic brain injury
Staining Method :  Alexa Fluor 488, immunostaining
Slicing Direction :  coronal
Slice Thickness :  30  μm
Tissue Shrinkage :  Not reported
Objective Type :  water or oil
Magnification :  400x
Reconstruction Method :  Imaris
Date of Deposition :  2022-07-04
Date of Upload :  2022-08-24
Persistence Vector :  210708-ipsi-03_25.pvec
Note :  This reconstruction was obtained from the ipsilateral hemisphere to the stab wound brain injury. The original Imaris file contains the cell body reconstruction.

Reference Article
Related Article Reference :  Inhibition of monoamine oxidase B prevents reactive astrogliosis and scar formation in stab wound injury model.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  53
Number of Branches :  108
Overall Width :  13.26 μm
Overall Height :  43.98 μm
Overall Depth :  20.86 μm
Average Diameter :  1.06 μm
Total Length :  532.7 μm
Total Surface :  1790.23 μm2
Total Volume :  595.27 μm3
Max Euclidean Distance :  27.74 μm
Max Path Distance :  86.76 μm
Max Branch Order :  20
Average Contraction :  0.92
Total Fragmentation :  1029
Partition Asymmetry :  0.64
Average Rall's Ratio :  1.9
Average Bifurcation Angle Local :  78.59°
Average Bifurcation Angle Remote :  76.95°
Fractal Dimension :  1.03

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website