8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_195437
Cell Name :  210708-ipsi-02_09
Archive Name :  Lee_CJ
Species Name :  mouse
Strain :  C57BL/6
Structural Domains :  Processes, No Soma
Physical Integrity :  Processes Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  4.0 months
Max Age :  4.0 months
Gender :  Male
Min Weight :  25 grams
Max Weight :  25 grams
Development :  adult
Primary Brain Region :  hippocampus
Secondary Brain Region :  CA1
Tertiary Brain Region :  stratum radiatum
Primary Cell Class :  Glia
Secondary Cell Class :  astrocyte
Tertiary Cell Class :  GFAP-positive
Original Format :  Imaris.ims
Experiment Protocol :  in vitro
Experimental Condition :  Traumatic brain injury
Staining Method :  Alexa Fluor 488, immunostaining
Slicing Direction :  coronal
Slice Thickness :  30  μm
Tissue Shrinkage :  Not reported
Objective Type :  water or oil
Magnification :  400x
Reconstruction Method :  Imaris
Date of Deposition :  2022-07-04
Date of Upload :  2022-08-24
Persistence Vector :  210708-ipsi-02_09.pvec
Note :  This reconstruction was obtained from the ipsilateral hemisphere to the stab wound brain injury. The original Imaris file contains the cell body reconstruction.

Reference Article
Related Article Reference :  Inhibition of monoamine oxidase B prevents reactive astrogliosis and scar formation in stab wound injury model.

Measurements
Soma Surface :  N/A
Number of Stems :  2
Number of Bifurcations :  14
Number of Branches :  30
Overall Width :  12.9 μm
Overall Height :  32.03 μm
Overall Depth :  19.12 μm
Average Diameter :  1.38 μm
Total Length :  166.67 μm
Total Surface :  726.63 μm2
Total Volume :  284.37 μm3
Max Euclidean Distance :  26.8 μm
Max Path Distance :  48.99 μm
Max Branch Order :  9
Average Contraction :  0.92
Total Fragmentation :  371
Partition Asymmetry :  0.63
Average Rall's Ratio :  1.98
Average Bifurcation Angle Local :  65.37°
Average Bifurcation Angle Remote :  65.59°
Fractal Dimension :  1.04

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