8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
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Log File (Original)



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NeuroMorpho.Org ID :  NMO_165371
Cell Name :  210254_4149-04161-X16164-Y21238
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  Sst-Cre;Ai139
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  anterior cingulate
Tertiary Brain Region :  dorsal, layer 6a
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  corticothalamic, narrow
Original Format :  Vaa3D.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Vaa3D
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  210254_4149-04161-X16164-Y21238.pvec
Note :  This reconstruction was obtained from the Allen Institute for Brain Science, and it is registered to the Common Coordinate Framework (CCF).

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  31.73 μm2
Number of Stems :  7
Number of Bifurcations :  147
Number of Branches :  301
Overall Width :  6818.56 μm
Overall Height :  3744.1 μm
Overall Depth :  1539.98 μm
Average Diameter :  2 μm
Total Length :  89414.4 μm
Total Surface :  561807 μm2
Total Volume :  280904 μm3
Max Euclidean Distance :  7097.23 μm
Max Path Distance :  15507.2 μm
Max Branch Order :  17
Average Contraction :  0.85
Total Fragmentation :  15400
Partition Asymmetry :  0.57
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  83.36°
Average Bifurcation Angle Remote :  72.02°
Fractal Dimension :  1.04

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