8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_165312
Cell Name :  210254_04397-04406-X16794-Y21812swc_sorted-ano
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  Sst-Cre;Ai139
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 6a
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  corticothalamic, narrow
Original Format :  Vaa3D.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Vaa3D
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  210254_04397-04406-X16794-Y21812swc_sorted-ano.pvec
Note :  This reconstruction was obtained from the Allen Institute for Brain Science, and it is registered to the Common Coordinate Framework (CCF). The soma of this cell was located at the border of MOp/MOs.

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  46.18 μm2
Number of Stems :  8
Number of Bifurcations :  131
Number of Branches :  270
Overall Width :  4936.73 μm
Overall Height :  8079.07 μm
Overall Depth :  1615.66 μm
Average Diameter :  2 μm
Total Length :  86427.1 μm
Total Surface :  543038 μm2
Total Volume :  271519 μm3
Max Euclidean Distance :  7619.92 μm
Max Path Distance :  14768 μm
Max Branch Order :  18
Average Contraction :  0.91
Total Fragmentation :  3509
Partition Asymmetry :  0.55
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  77.38°
Average Bifurcation Angle Remote :  67.21°
Fractal Dimension :  1.02

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