8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_165565
Cell Name :  210254_02627-02641-X17126-Y20600
Archive Name :  BICCN-MOp-miniatlas-anatomy
Species Name :  mouse
Strain :  Gnb4-IRES2-CreERT2;Ai139-hyg
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  56.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  secondary motor, layer 6b
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Intratelencephalic (IT), tufted, bilateral-projecting
Original Format :  Vaa3D.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  enhanced green fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  dry
Magnification :  40x
Reconstruction Method :  Vaa3D
Date of Deposition :  2020-04-03
Date of Upload :  2021-10-06
Persistence Vector :  210254_02627-02641-X17126-Y20600.pvec
Note :  This reconstruction was obtained from the Allen Institute for Brain Science, and it is registered to the Common Coordinate Framework (CCF).

Reference Article
Related Article Reference :  Cellular Anatomy of the Mouse Primary Motor Cortex

Measurements
Soma Surface :  99.9 μm2
Number of Stems :  8
Number of Bifurcations :  289
Number of Branches :  586
Overall Width :  11527.3 μm
Overall Height :  7060.14 μm
Overall Depth :  5934.7 μm
Average Diameter :  2 μm
Total Length :  147219 μm
Total Surface :  925002 μm2
Total Volume :  462501 μm3
Max Euclidean Distance :  13673.6 μm
Max Path Distance :  25495.6 μm
Max Branch Order :  36
Average Contraction :  0.88
Total Fragmentation :  22281
Partition Asymmetry :  0.63
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  71.11°
Average Bifurcation Angle Remote :  67.29°
Fractal Dimension :  1.04

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website