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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_296534 |
| Cell Name : | 20739L2vC1_SkeletonTree |
| Archive Name : | Witter |
| Species Name : | rat |
| Strain : | Sprague-Dawley |
| Structural Domains : | Dendrites, Soma, No Axon |
| Physical Integrity : | Dendrites Moderate |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 3.0 months
|
| Max Age : | 6.0 months
|
| Gender : |
Female
|
| Min Weight : | 180 grams
|
| Max Weight : | 245 grams
|
| Development : | adult |
| Primary Brain Region : | entorhinal cortex |
| Secondary Brain Region : | medial |
| Tertiary Brain Region : | ventral, left, layer 5-6 |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | pyramidal |
| Tertiary Cell Class : | Spiny, glutamatergic |
| Original Format : | Amira.swc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | Alexa Fluor 568 |
| Slicing Direction : | horizontal |
| Slice Thickness : | 400
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 63x |
| Reconstruction Method : | Amira |
| Date of Deposition : | 2025-03-04 |
| Date of Upload : | 2025-03-31 |
| Persistence Vector : | 20739L2vC1_SkeletonTree.pvec |
| Note : | This cell was retrogradely labeled by injection of FastBlue into MEC layer II/III. This reconstruction was obtained from slice 2, corresponding to the following coordinates: Bregma d/v -4.20 to -4.60. The cytoplasmic tracer injections were usually close to the slice surface. The original reconstruction contains dendritic spines. |
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| Reference Article |
| Related Article Reference : | Retrosplenial and subicular inputs converge on superficially projecting layer V neurons of medial entorhinal cortex. |
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| Measurements |
| Soma Surface : |
421.28 μm2 |
| Number of Stems : |
6 |
| Number of Bifurcations : |
1931 |
| Number of Branches : |
3868 |
| Overall Width : |
122.85 μm |
| Overall Height : |
177.16 μm |
| Overall Depth : |
88.39 μm |
| Average Diameter : |
0.57 μm |
| Total Length : |
4468.01 μm |
| Total Surface : |
7952.39 μm2 |
| Total Volume : |
1187.08 μm3 |
| Max Euclidean Distance : |
143.94 μm |
| Max Path Distance : |
179.9 μm |
| Max Branch Order : |
251 |
| Average Contraction : |
0.98 |
| Total Fragmentation : |
9991 |
| Partition Asymmetry : |
0.98 |
| Average Rall's Ratio : |
1.95 |
| Average Bifurcation Angle Local : |
97.63° |
| Average Bifurcation Angle Remote : |
94.5° |
| Fractal Dimension : |
1.02 |
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