8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_161249
Cell Name :  20191107_sample_4
Archive Name :  Tolias
Species Name :  mouse
Strain :  SST-cre;Ai9
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  78.0 days
Max Age :  78.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 5
Primary Cell Class :  interneuron
Secondary Cell Class :  Somatostatin (SOM)-positive
Tertiary Cell Class :  Medial Ganglionic Eminence (MGE)-derived
Original Format :  Neurolucida.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2020-01-24
Date of Upload :  2021-08-05
Persistence Vector :  20191107_sample_4.pvec
Note :  Lower L2/3 and upper L5, Martinotti morphology. Compared to Calb2, denser local axons, sparser "Fanning-out" projections to L1, smaller time constant. Non-zero ADP.

Reference Article
Related Article Reference :  Phenotypic variation of transcriptomic cell types in mouse motor cortex.

Measurements
Soma Surface :  465.57 μm2
Number of Stems :  6
Number of Bifurcations :  215
Number of Branches :  436
Overall Width :  360.6 μm
Overall Height :  500.46 μm
Overall Depth :  260.03 μm
Average Diameter :  0.2 μm
Total Length :  23998.4 μm
Total Surface :  14724.8 μm2
Total Volume :  2885.54 μm3
Max Euclidean Distance :  437.02 μm
Max Path Distance :  1341.51 μm
Max Branch Order :  37
Average Contraction :  0.71
Total Fragmentation :  6089
Partition Asymmetry :  0.56
Average Rall's Ratio :  2.03
Average Bifurcation Angle Local :  85.58°
Average Bifurcation Angle Remote :  80.66°
Fractal Dimension :  1.07

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