8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_161278
Cell Name :  20191101_sample_4
Archive Name :  Tolias
Species Name :  mouse
Strain :  Viaat-Cre;Ai9
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  64.0 days
Max Age :  64.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 6
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  corticothalamic, Vesicular inhibitory amino acid transporter (VIAAT)-positive
Original Format :  Neurolucida.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2020-01-24
Date of Upload :  2021-08-05
Persistence Vector :  20191101_sample_4.pvec
Note :  Corticothalamic (CT) types were located in L6 and lower L5 and had mostly untufted apical dendrites. Exhibit lower inter-spike interval adaptation.

Reference Article
Related Article Reference :  Phenotypic variation of transcriptomic cell types in mouse motor cortex.

Measurements
Soma Surface :  127.32 μm2
Number of Stems :  9
Number of Bifurcations :  12
Number of Branches :  33
Overall Width :  130.51 μm
Overall Height :  196.76 μm
Overall Depth :  82.84 μm
Average Diameter :  1.29 μm
Total Length :  2422.45 μm
Total Surface :  9752.8 μm2
Total Volume :  3166.81 μm3
Max Euclidean Distance :  128.11 μm
Max Path Distance :  225.88 μm
Max Branch Order :  2
Average Contraction :  0.69
Total Fragmentation :  1812
Partition Asymmetry :  0.25
Average Rall's Ratio :  1.83
Average Bifurcation Angle Local :  83.07°
Average Bifurcation Angle Remote :  65.3°
Fractal Dimension :  1.09

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