8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_161828
Cell Name :  20190718_sample_5
Archive Name :  Tolias
Species Name :  mouse
Strain :  VIP-Cre;Ai9
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  140.0 days
Max Age :  140.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 5
Primary Cell Class :  interneuron
Secondary Cell Class :  Vasoactive Intestinal Peptide (VIP)-positive
Tertiary Cell Class :  Caudal Ganglionic Eminence (CGE)-derived
Original Format :  Neurolucida.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2020-01-24
Date of Upload :  2021-08-05
Persistence Vector :  20190718_sample_5.pvec
Note :  L5, mostly local morphology, some cells with deep-projecting axons. Bipolar cells located in L2/3 and upper L5. Calbindin 2 positive. Low resting membrane potential, moderate input resistance comparable to the SOM subclass. This type also had particularly low resting membrane potential.

Reference Article
Related Article Reference :  Phenotypic variation of transcriptomic cell types in mouse motor cortex.

Measurements
Soma Surface :  739.29 μm2
Number of Stems :  4
Number of Bifurcations :  32
Number of Branches :  68
Overall Width :  257.68 μm
Overall Height :  349.59 μm
Overall Depth :  164.69 μm
Average Diameter :  0.28 μm
Total Length :  4919.42 μm
Total Surface :  4066.84 μm2
Total Volume :  858.66 μm3
Max Euclidean Distance :  288.54 μm
Max Path Distance :  495.86 μm
Max Branch Order :  14
Average Contraction :  0.69
Total Fragmentation :  3855
Partition Asymmetry :  0.55
Average Rall's Ratio :  2.37
Average Bifurcation Angle Local :  104.03°
Average Bifurcation Angle Remote :  82.22°
Fractal Dimension :  1.09

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website