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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_161643 |
| Cell Name : | 20190625_sample_1 |
| Archive Name : | Tolias |
| Species Name : | mouse |
| Strain : | VIP-Cre;Ai9 |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites Complete, Axon Moderate |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 65.0 days
|
| Max Age : | 65.0 days
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | frontal |
| Tertiary Brain Region : | primary motor, layer 5 |
| Primary Cell Class : | interneuron |
| Secondary Cell Class : | Vasoactive Intestinal Peptide (VIP)-positive |
| Tertiary Cell Class : | Caudal Ganglionic Eminence (CGE)-derived |
| Original Format : | Neurolucida.swc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | biocytin |
| Slicing Direction : | coronal |
| Slice Thickness : | 300
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2020-01-24 |
| Date of Upload : | 2021-08-05 |
| Persistence Vector : | 20190625_sample_1.pvec |
| Note : | L5, mostly local morphology, some cells with deep-projecting axons. Bipolar cells located in L2/3 and upper L5. Calbindin 2 positive. Low resting membrane potential, moderate input resistance comparable to the SOM subclass. This type also had particularly low resting membrane potential. Transcriptomically this reconstruction belongs to Vip Chat_1 subclass. |
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| Reference Article |
| Related Article Reference : | Phenotypic variation of transcriptomic cell types in mouse motor cortex. |
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| Measurements |
| Soma Surface : |
95.59 μm2 |
| Number of Stems : |
6 |
| Number of Bifurcations : |
18 |
| Number of Branches : |
42 |
| Overall Width : |
154.89 μm |
| Overall Height : |
569.78 μm |
| Overall Depth : |
125.49 μm |
| Average Diameter : |
0.37 μm |
| Total Length : |
2863.92 μm |
| Total Surface : |
3433.42 μm2 |
| Total Volume : |
460.06 μm3 |
| Max Euclidean Distance : |
463.02 μm |
| Max Path Distance : |
569.1 μm |
| Max Branch Order : |
5 |
| Average Contraction : |
0.81 |
| Total Fragmentation : |
2187 |
| Partition Asymmetry : |
0.49 |
| Average Rall's Ratio : |
1.41 |
| Average Bifurcation Angle Local : |
74.87° |
| Average Bifurcation Angle Remote : |
63.99° |
| Fractal Dimension : |
1.05 |
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