8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_161412
Cell Name :  20190619_sample_6
Archive Name :  Tolias
Species Name :  mouse
Strain :  Vipr2-Cre;Ai9
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites Complete, Axon Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  53.0 days
Max Age :  53.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 2-3
Primary Cell Class :  interneuron
Secondary Cell Class :  Inhibitory
Tertiary Cell Class :  Vasoactive intestinal peptide receptor 2 (VIPR2)-positive, Caudal Ganglionic Eminence (CGE)-derived
Original Format :  Neurolucida.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2020-01-24
Date of Upload :  2021-08-05
Persistence Vector :  20190619_sample_6.pvec
Note :  Neuron-derived neurotrophic factor (Ndnf)-negative. NGCs in layers 2/3, L5, and L6, showing layer-adapting axonal morphology.

Reference Article
Related Article Reference :  Phenotypic variation of transcriptomic cell types in mouse motor cortex.

Measurements
Soma Surface :  252.3 μm2
Number of Stems :  10
Number of Bifurcations :  164
Number of Branches :  338
Overall Width :  212.98 μm
Overall Height :  171.06 μm
Overall Depth :  86.25 μm
Average Diameter :  0.14 μm
Total Length :  10047.5 μm
Total Surface :  4381.08 μm2
Total Volume :  318.47 μm3
Max Euclidean Distance :  168.25 μm
Max Path Distance :  706.42 μm
Max Branch Order :  31
Average Contraction :  0.72
Total Fragmentation :  8345
Partition Asymmetry :  0.53
Average Rall's Ratio :  1.82
Average Bifurcation Angle Local :  85.43°
Average Bifurcation Angle Remote :  82.32°
Fractal Dimension :  1.09

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