8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_161284
Cell Name :  20190509_sample_9
Archive Name :  Tolias
Species Name :  mouse
Strain :  VIP-Cre;Ai9
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  74.0 days
Max Age :  74.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 5
Primary Cell Class :  interneuron
Secondary Cell Class :  Vasoactive Intestinal Peptide (VIP)-positive
Tertiary Cell Class :  Caudal Ganglionic Eminence (CGE)-derived
Original Format :  Neurolucida.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2020-01-24
Date of Upload :  2021-08-05
Persistence Vector :  20190509_sample_9.pvec
Note :  L5, mostly local morphology, some cells with deep-projecting axons. Bipolar cells located in L2/3 and upper L5. Calbindin 2 positive. Low resting membrane potential, moderate input resistance comparable to the SOM subclass. This type also had particularly low resting membrane potential.

Reference Article
Related Article Reference :  Phenotypic variation of transcriptomic cell types in mouse motor cortex.

Measurements
Soma Surface :  1209.83 μm2
Number of Stems :  4
Number of Bifurcations :  28
Number of Branches :  60
Overall Width :  135.19 μm
Overall Height :  665.68 μm
Overall Depth :  157.75 μm
Average Diameter :  0.41 μm
Total Length :  3474.81 μm
Total Surface :  4529.72 μm2
Total Volume :  583.9 μm3
Max Euclidean Distance :  488.49 μm
Max Path Distance :  661.27 μm
Max Branch Order :  6
Average Contraction :  0.79
Total Fragmentation :  2347
Partition Asymmetry :  0.61
Average Rall's Ratio :  1.61
Average Bifurcation Angle Local :  89.04°
Average Bifurcation Angle Remote :  59.42°
Fractal Dimension :  1.06

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