8.6.96 - Released: 2025-11-05 - Content: 284158 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_161418
Cell Name :  20190423_sample_3
Archive Name :  Tolias
Species Name :  mouse
Strain :  Pvalb-Cre;Ai9
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  76.0 days
Max Age :  76.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 6
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Excitatory, corticothalamic, Parvalbumin (PV)-negative
Original Format :  Neurolucida.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2020-01-24
Date of Upload :  2021-08-05
Persistence Vector :  20190423_sample_3.pvec
Note :  Corticothalamic (CT) types were located in L6 and lower L5 and had mostly untufted apical dendrites. Exhibit lower inter-spike interval adaptation.

Reference Article
Related Article Reference :  Phenotypic variation of transcriptomic cell types in mouse motor cortex.

Measurements
Soma Surface :  295.04 μm2
Number of Stems :  4
Number of Bifurcations :  10
Number of Branches :  24
Overall Width :  212.72 μm
Overall Height :  457.18 μm
Overall Depth :  157.48 μm
Average Diameter :  1.25 μm
Total Length :  2091.52 μm
Total Surface :  7830.35 μm2
Total Volume :  3027.88 μm3
Max Euclidean Distance :  409.14 μm
Max Path Distance :  559.78 μm
Max Branch Order :  8
Average Contraction :  0.81
Total Fragmentation :  661
Partition Asymmetry :  0.68
Average Rall's Ratio :  1.33
Average Bifurcation Angle Local :  68.33°
Average Bifurcation Angle Remote :  67.75°
Fractal Dimension :  1.05

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