8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_161588
Cell Name :  20190422_sample_1
Archive Name :  Tolias
Species Name :  mouse
Strain :  Pvalb-Cre;Ai9
Structural Domains :  Dendrites, Soma, No Axon
Physical Integrity :  Dendrites Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  75.0 days
Max Age :  75.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  frontal
Tertiary Brain Region :  primary motor, layer 6
Primary Cell Class :  interneuron
Secondary Cell Class :  Parvalbumin (PV)-positive
Tertiary Cell Class :  Inhibitory, Fast-spiking, Medial Ganglionic Eminence (MGE)-derived
Original Format :  Neurolucida.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  coronal
Slice Thickness :  300  μm
Tissue Shrinkage :  Not reported
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2020-01-24
Date of Upload :  2021-08-05
Persistence Vector :  20190422_sample_1.pvec
Note :  Lower L5 and L6, fast-spiking. A variety of axonal morphologies, including some with large arborization, including some with large arborization with dense spherical shape.

Reference Article
Related Article Reference :  Phenotypic variation of transcriptomic cell types in mouse motor cortex.

Measurements
Soma Surface :  16.17 μm2
Number of Stems :  7
Number of Bifurcations :  21
Number of Branches :  49
Overall Width :  193.04 μm
Overall Height :  356.57 μm
Overall Depth :  134.04 μm
Average Diameter :  0.61 μm
Total Length :  3013.83 μm
Total Surface :  5780.38 μm2
Total Volume :  1027.78 μm3
Max Euclidean Distance :  326.87 μm
Max Path Distance :  431.88 μm
Max Branch Order :  6
Average Contraction :  0.76
Total Fragmentation :  2320
Partition Asymmetry :  0.5
Average Rall's Ratio :  1.47
Average Bifurcation Angle Local :  97.05°
Average Bifurcation Angle Remote :  67.14°
Fractal Dimension :  1.07

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