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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_152566 |
| Cell Name : | 20180928_C4_WT |
| Archive Name : | Fried |
| Species Name : | mouse |
| Strain : | C56BL/6J |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites Complete, Axon Moderate |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 35.0 days
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| Max Age : | 120.0 days
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| Gender : |
Male/Female
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| Min Weight : | Not reported
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| Max Weight : | Not reported
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| Development : | adult |
| Primary Brain Region : | retina |
| Secondary Brain Region : | Not reported |
| Tertiary Brain Region : | Not reported |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | ganglion |
| Tertiary Cell Class : | ON-transient |
| Original Format : | Simple Neurite Tracer.swc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | Streptavidin-Alexa Fluor 488 |
| Slicing Direction : | whole mount |
| Slice Thickness : | Not applicable
|
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 20x ,63x |
| Reconstruction Method : | Simple Neurite Tracer |
| Date of Deposition : | 2021-01-19 |
| Date of Upload : | 2021-06-04 |
| Persistence Vector : | 20180928_C4_WT.pvec |
| Note : | Images of the full RGC dendritic field morphology were acquired with 20x magnification at a x/y/z resolution of 0.15 x 0.15 x 0.31 microns, while images of the soma, as well as proximal axon with AIS labeling were acquired with a 63x oil immersion objective (NA=1.4) at a x/y/z resolution of 0.09 x 0.09 X 0.31 microns. A straight axon was purposefully added by the original authors to the traced cells to avoid the edge effects at axon terminals when simulating extracellular electric stimulation and its impact on RGCs |
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| Reference Article |
| Related Article Reference : | The relationship between morphological properties and thresholds to extracellular electric stimulation in α RGCs. |
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| Measurements |
| Soma Surface : |
1762.43 μm2 |
| Number of Stems : |
5 |
| Number of Bifurcations : |
83 |
| Number of Branches : |
171 |
| Overall Width : |
669.16 μm |
| Overall Height : |
946.43 μm |
| Overall Depth : |
6.83 μm |
| Average Diameter : |
0.84 μm |
| Total Length : |
6304.96 μm |
| Total Surface : |
16627.6 μm2 |
| Total Volume : |
3721.98 μm3 |
| Max Euclidean Distance : |
991.72 μm |
| Max Path Distance : |
1012.92 μm |
| Max Branch Order : |
9 |
| Average Contraction : |
0.93 |
| Total Fragmentation : |
1985 |
| Partition Asymmetry : |
0.45 |
| Average Rall's Ratio : |
1.78 |
| Average Bifurcation Angle Local : |
69.75° |
| Average Bifurcation Angle Remote : |
70.36° |
| Fractal Dimension : |
1.02 |
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