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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_161366 |
| Cell Name : | 20180102_sample_1 |
| Archive Name : | Tolias |
| Species Name : | mouse |
| Strain : | Pvalb-Cre;Ai9 |
| Structural Domains : | Dendrites, Soma, No Axon |
| Physical Integrity : | Dendrites Complete |
| Morphological Attributes : | No Diameter, 3D, Angles |
| Min Age : | 75.0 days
|
| Max Age : | 75.0 days
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | frontal |
| Tertiary Brain Region : | primary motor, layer 5 |
| Primary Cell Class : | principal cell |
| Secondary Cell Class : | pyramidal |
| Tertiary Cell Class : | Excitatory, Parvalbumin (PV)-negative, Extratelencephalic (ET) |
| Original Format : | Neurolucida.swc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | biocytin |
| Slicing Direction : | coronal |
| Slice Thickness : | 300
μm |
| Tissue Shrinkage : |
Not reported
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2020-01-24 |
| Date of Upload : | 2021-08-05 |
| Persistence Vector : | 20180102_sample_1.pvec |
| Note : | Large big-tufted cells with the apical dendrite often bifurcating close to the soma, suggesting that these were corticospinal cells. They had bigger hyperpolarization sag, lower input resistance, and smaller AP width, compared to the L5 IT neurons. We did not observe consistent morpho-electric differences between the four ET types, apart from L5 ET_1 being located deeper than the rest, but they may have different projection targets. |
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| Reference Article |
| Related Article Reference : | Phenotypic variation of transcriptomic cell types in mouse motor cortex. |
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| Measurements |
| Soma Surface : |
1322.44 μm2 |
| Number of Stems : |
5 |
| Number of Bifurcations : |
50 |
| Number of Branches : |
105 |
| Overall Width : |
269.51 μm |
| Overall Height : |
827.37 μm |
| Overall Depth : |
75.5 μm |
| Average Diameter : |
0.41 μm |
| Total Length : |
6995.99 μm |
| Total Surface : |
9037.18 μm2 |
| Total Volume : |
1952.52 μm3 |
| Max Euclidean Distance : |
731.48 μm |
| Max Path Distance : |
945.27 μm |
| Max Branch Order : |
19 |
| Average Contraction : |
0.8 |
| Total Fragmentation : |
3085 |
| Partition Asymmetry : |
0.54 |
| Average Rall's Ratio : |
1.19 |
| Average Bifurcation Angle Local : |
80.55° |
| Average Bifurcation Angle Remote : |
67.49° |
| Fractal Dimension : |
1.06 |
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