8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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Details about selected cell
NeuroMorpho.Org ID :  NMO_128198
Cell Name :  20170506
Archive Name :  Rochefort
Species Name :  mouse
Strain :  B6.Cg-Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/J (JAX# 007914)
Structural Domains :  Dendrites, No Soma, No Axon
Physical Integrity :  Dendrites Incomplete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  56.0 days
Max Age :  80.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual, layer 5, left
Primary Cell Class :  principal cell
Secondary Cell Class :  pyramidal
Tertiary Cell Class :  Not reported
Original Format :  Simple Neurite Tracer.traces
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  GCaMP6f + Td tomato
Slicing Direction :  Not applicable
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  25x
Reconstruction Method :  Simple Neurite Tracer
Date of Deposition :  2020-01-29
Date of Upload :  2020-06-29
Persistence Vector :  20170506.pvec
Note :  Only apical dendrites are included; reconstruction is limited to the portion of dendrites present in the field of view under two-photon imaging (240x240um, x,y) and does not include branches deeper than the nexus. Diameter is N/A: the value reported in the summary metric corresponds to default minimum, not to a real measurement

Reference Article
Related Article Reference :  High and asymmetric somato-dendritic coupling of V1 layer 5 neurons independent of visual stimulation and locomotion.

Measurements
Soma Surface :  N/A
Number of Stems :  1
Number of Bifurcations :  34
Number of Branches :  69
Overall Width :  249.62 μm
Overall Height :  557.19 μm
Overall Depth :  221.96 μm
Average Diameter :  0.25 μm
Total Length :  2718.49 μm
Total Surface :  2135.1 μm2
Total Volume :  133.44 μm3
Max Euclidean Distance :  578.51 μm
Max Path Distance :  1010.04 μm
Max Branch Order :  17
Average Contraction :  0.87
Total Fragmentation :  2021
Partition Asymmetry :  0.74
Average Rall's Ratio :  2
Average Bifurcation Angle Local :  85.12°
Average Bifurcation Angle Remote :  69.76°
Fractal Dimension :  1.05

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