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Details about selected cell |
NeuroMorpho.Org ID : | NMO_128198 |
Cell Name : | 20170506 |
Archive Name : | Rochefort |
Species Name : | mouse |
Strain : | B6.Cg-Gt(ROSA)26Sortm14(CAG-tdTomato)Hze/J (JAX# 007914) |
Structural Domains : | Dendrites, No Soma, No Axon |
Physical Integrity : | Dendrites Incomplete |
Morphological Attributes : | No Diameter, 3D, Angles |
Min Age : | 56.0 days
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Max Age : | 80.0 days
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Gender : |
Male/Female
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Min Weight : | Not reported
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Max Weight : | Not reported
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Development : | adult |
Primary Brain Region : | neocortex |
Secondary Brain Region : | occipital |
Tertiary Brain Region : | primary visual, layer 5, left |
Primary Cell Class : | principal cell |
Secondary Cell Class : | pyramidal |
Tertiary Cell Class : | Not reported |
Original Format : | Simple Neurite Tracer.traces |
Experiment Protocol : | in vivo |
Experimental Condition : | Control |
Staining Method : | GCaMP6f + Td tomato |
Slicing Direction : | Not applicable |
Slice Thickness : | Not applicable
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Tissue Shrinkage : |
Not reported
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Objective Type : | water |
Magnification : | 25x |
Reconstruction Method : | Simple Neurite Tracer |
Date of Deposition : | 2020-01-29 |
Date of Upload : | 2020-06-29 |
Persistence Vector : | 20170506.pvec |
Note : | Only apical dendrites are included; reconstruction is limited to the portion of dendrites present in the field of view under two-photon imaging (240x240um, x,y) and does not include branches deeper than the nexus. Diameter is N/A: the value reported in the summary metric corresponds to default minimum, not to a real measurement |
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Reference Article |
Related Article Reference : | High and asymmetric somato-dendritic coupling of V1 layer 5 neurons independent of visual stimulation and locomotion. |
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Measurements |
Soma Surface : |
N/A |
Number of Stems : |
1 |
Number of Bifurcations : |
34 |
Number of Branches : |
69 |
Overall Width : |
249.62 μm |
Overall Height : |
557.19 μm |
Overall Depth : |
221.96 μm |
Average Diameter : |
0.25 μm |
Total Length : |
2718.49 μm |
Total Surface : |
2135.1 μm2 |
Total Volume : |
133.44 μm3 |
Max Euclidean Distance : |
578.51 μm |
Max Path Distance : |
1010.04 μm |
Max Branch Order : |
17 |
Average Contraction : |
0.87 |
Total Fragmentation : |
2021 |
Partition Asymmetry : |
0.74 |
Average Rall's Ratio : |
2 |
Average Bifurcation Angle Local : |
85.12° |
Average Bifurcation Angle Remote : |
69.76° |
Fractal Dimension : |
1.05 |
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