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| Details about selected cell |
| NeuroMorpho.Org ID : | NMO_130612 |
| Cell Name : | 2017-11-09-slice-1-cell-2-rotated |
| Archive Name : | Tolias |
| Species Name : | mouse |
| Strain : | Not reported |
| Structural Domains : | Dendrites, Soma, Axon |
| Physical Integrity : | Dendrites & Axon Complete |
| Morphological Attributes : | Diameter, 3D, Angles |
| Min Age : | 50.0 days
|
| Max Age : | 330.0 days
|
| Gender : |
Male/Female
|
| Min Weight : | Not reported
|
| Max Weight : | Not reported
|
| Development : | adult |
| Primary Brain Region : | neocortex |
| Secondary Brain Region : | occipital |
| Tertiary Brain Region : | primary visual, layer 4 |
| Primary Cell Class : | interneuron |
| Secondary Cell Class : | Martinotti |
| Tertiary Cell Class : | Somatostatin (SOM)-positive |
| Original Format : | Neurolucida.swc |
| Experiment Protocol : | in vitro |
| Experimental Condition : | Control |
| Staining Method : | biocytin |
| Slicing Direction : | parasagittal |
| Slice Thickness : | 300
μm |
| Tissue Shrinkage : |
Reported 15%
Not corrected
|
| Objective Type : | oil |
| Magnification : | 100x |
| Reconstruction Method : | Neurolucida |
| Date of Deposition : | 2020-03-16 |
| Date of Upload : | 2020-06-29 |
| Persistence Vector : | 2017-11-09-slice-1-cell-2-rotated.pvec |
| Note : | In the Morphology File (Original) version of the SWC files the z axis is to aligned with the normal towards the pia |
|
|
| Reference Article |
| Related Article Reference : | Layer 4 of mouse neocortex differs in cell types and circuit organization between sensory areas. |
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|
| Measurements |
| Soma Surface : |
1053.56 μm2 |
| Number of Stems : |
4 |
| Number of Bifurcations : |
62 |
| Number of Branches : |
128 |
| Overall Width : |
270.99 μm |
| Overall Height : |
552.38 μm |
| Overall Depth : |
71.02 μm |
| Average Diameter : |
0.3 μm |
| Total Length : |
8233.88 μm |
| Total Surface : |
7522.03 μm2 |
| Total Volume : |
1144.47 μm3 |
| Max Euclidean Distance : |
370.98 μm |
| Max Path Distance : |
573.01 μm |
| Max Branch Order : |
14 |
| Average Contraction : |
0.77 |
| Total Fragmentation : |
17704 |
| Partition Asymmetry : |
0.5 |
| Average Rall's Ratio : |
1.84 |
| Average Bifurcation Angle Local : |
78.64° |
| Average Bifurcation Angle Remote : |
65.19° |
| Fractal Dimension : |
1.07 |
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