8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_130665
Cell Name :  2017-04-07-slice-4-cell-6-rotated
Archive Name :  Tolias
Species Name :  mouse
Strain :  Not reported
Structural Domains :  Dendrites, Soma, Axon
Physical Integrity :  Dendrites & Axon Complete
Morphological Attributes :  Diameter, 3D, Angles
Min Age :  50.0 days
Max Age :  330.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  adult
Primary Brain Region :  neocortex
Secondary Brain Region :  occipital
Tertiary Brain Region :  primary visual, layer 4
Primary Cell Class :  interneuron
Secondary Cell Class :  basket
Tertiary Cell Class :  Fast-spiking, Parvalbumin (PV)-positive, double-bouquet
Original Format :  Neurolucida.swc
Experiment Protocol :  in vitro
Experimental Condition :  Control
Staining Method :  biocytin
Slicing Direction :  parasagittal
Slice Thickness :  300  μm
Tissue Shrinkage :  Reported 15%
Not corrected
Objective Type :  oil
Magnification :  100x
Reconstruction Method :  Neurolucida
Date of Deposition :  2020-03-16
Date of Upload :  2020-06-29
Persistence Vector :  2017-04-07-slice-4-cell-6-rotated.pvec
Note :  This double bouquet cell class is defined as a sub-type of fast-spiking PV+ basket cell with two wide axonal bundles of similar size going in opposite directions. In the Morphology File (Original) version of the SWC files the z axis is to aligned with the normal towards the pia

Reference Article
Related Article Reference :  Layer 4 of mouse neocortex differs in cell types and circuit organization between sensory areas.

Measurements
Soma Surface :  495.94 μm2
Number of Stems :  4
Number of Bifurcations :  76
Number of Branches :  156
Overall Width :  220.72 μm
Overall Height :  493.55 μm
Overall Depth :  88.98 μm
Average Diameter :  0.11 μm
Total Length :  10181.4 μm
Total Surface :  3354.43 μm2
Total Volume :  232.86 μm3
Max Euclidean Distance :  381.5 μm
Max Path Distance :  725.58 μm
Max Branch Order :  13
Average Contraction :  0.84
Total Fragmentation :  11744
Partition Asymmetry :  0.46
Average Rall's Ratio :  1.95
Average Bifurcation Angle Local :  72.95°
Average Bifurcation Angle Remote :  63.9°
Fractal Dimension :  1.05

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