8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



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NeuroMorpho.Org ID :  NMO_282682
Cell Name :  20161011_BGUG_HuC_ltRFP_d5_F3
Archive Name :  Baier
Species Name :  zebrafish
Strain :  Gal4-s1013tET
Structural Domains :  Neurites, Soma
Physical Integrity :  Neurites Moderate
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.0 days
Max Age :  7.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  mesencephalon
Secondary Brain Region :  torus semicircularis
Tertiary Brain Region :  Not reported
Primary Cell Class :  principal cell
Secondary Cell Class :  Periventricular Projection Neurons (PVPN)
Tertiary Cell Class :  Dorsal thalamus-projecting, Pretectum-projecting, Medulla oblongata-projecting, Hypothalamus-projecting, Nucleus Isthmi-projecting, Class 3, Tectum-projecting
Original Format :  neuTube.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  green fluorescent protein
Slicing Direction :  whole mount
Slice Thickness :  Not applicable
Tissue Shrinkage :  Not reported
Objective Type :  electron microscopy
Magnification :  20x
Reconstruction Method :  neuTube
Date of Deposition :  2020-11-24
Date of Upload :  2024-04-30
Persistence Vector :  20161011_BGUG_HuC_ltRFP_d5_F3.pvec

Reference Article
Related Article Reference :  Topography of a Visuomotor Transformation.

Measurements
Soma Surface :  2121.22 μm2
Number of Stems :  4
Number of Bifurcations :  76
Number of Branches :  156
Overall Width :  77.67 μm
Overall Height :  320.22 μm
Overall Depth :  120.17 μm
Average Diameter :  4.83 μm
Total Length :  1823.74 μm
Total Surface :  28945.3 μm2
Total Volume :  39520.1 μm3
Max Euclidean Distance :  339.05 μm
Max Path Distance :  421.01 μm
Max Branch Order :  16
Average Contraction :  0.92
Total Fragmentation :  877
Partition Asymmetry :  0.64
Average Rall's Ratio :  2.62
Average Bifurcation Angle Local :  75.37°
Average Bifurcation Angle Remote :  69.86°
Fractal Dimension :  1.04

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