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Details about selected cell |
NeuroMorpho.Org ID : | NMO_282747 |
Cell Name : | 20161005_BGUG_HuC_ltRFP_d6_F2 |
Archive Name : | Baier |
Species Name : | zebrafish |
Strain : | Gal4-s1013tET |
Structural Domains : | No Dendrites, Soma, Axon |
Physical Integrity : | Axon Complete |
Morphological Attributes : | No Diameter, 3D, Angles |
Min Age : | 5.0 days
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Max Age : | 7.0 days
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Gender : |
Male/Female
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Min Weight : | Not reported
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Max Weight : | Not reported
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Development : | larval |
Primary Brain Region : | mesencephalon |
Secondary Brain Region : | midbrain tegmentum |
Tertiary Brain Region : | torus semicircularis |
Primary Cell Class : | interneuron |
Secondary Cell Class : | Not reported |
Tertiary Cell Class : | Not reported |
Original Format : | neuTube.swc |
Experiment Protocol : | in vivo |
Experimental Condition : | Control |
Staining Method : | photo-activatable green fluorescent protein (pa-GFP) |
Slicing Direction : | transverse |
Slice Thickness : | 0.01
μm |
Tissue Shrinkage : |
Not reported
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Objective Type : | water |
Magnification : | 20x |
Reconstruction Method : | neuTube |
Date of Deposition : | 2020-11-18 |
Date of Upload : | 2024-04-30 |
Persistence Vector : | 20161005_BGUG_HuC_ltRFP_d6_F2.pvec |
Note : | This reconstruction is classified as periventricular interneuron (PVIN) in the original publication. |
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Reference Article |
Related Article Reference : | Retinotectal circuitry of larval zebrafish is adapted to detection and pursuit of prey. |
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Measurements |
Soma Surface : |
305.01 μm2 |
Number of Stems : |
1 |
Number of Bifurcations : |
28 |
Number of Branches : |
57 |
Overall Width : |
37.04 μm |
Overall Height : |
60.65 μm |
Overall Depth : |
18.29 μm |
Average Diameter : |
5.37 μm |
Total Length : |
426.29 μm |
Total Surface : |
7339.09 μm2 |
Total Volume : |
10643.3 μm3 |
Max Euclidean Distance : |
68.49 μm |
Max Path Distance : |
96.8 μm |
Max Branch Order : |
14 |
Average Contraction : |
0.92 |
Total Fragmentation : |
213 |
Partition Asymmetry : |
0.64 |
Average Rall's Ratio : |
1.9 |
Average Bifurcation Angle Local : |
88.29° |
Average Bifurcation Angle Remote : |
85.74° |
Fractal Dimension : |
1.06 |
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