8.6.79 - Released: 2025-04-16 - Content: 273841 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_282905
Cell Name :  20160927_BGUG_HuC_ltRFP_d6_F4_N2
Archive Name :  Baier
Species Name :  zebrafish
Strain :  Gal4-s1013tET
Structural Domains :  No Dendrites, Soma, Axon
Physical Integrity :  Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.0 days
Max Age :  7.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  medulla
Secondary Brain Region :  Nucleus Isthmi
Tertiary Brain Region :  Not reported
Primary Cell Class :  interneuron
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  neuTube.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  photo-activatable green fluorescent protein (pa-GFP)
Slicing Direction :  transverse
Slice Thickness :  0.01  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  20x
Reconstruction Method :  neuTube
Date of Deposition :  2020-11-18
Date of Upload :  2024-04-30
Persistence Vector :  20160927_BGUG_HuC_ltRFP_d6_F4_N2.pvec
Note :  This reconstruction is classified as periventricular interneuron (PVIN) in the original publication.

Reference Article
Related Article Reference :  Retinotectal circuitry of larval zebrafish is adapted to detection and pursuit of prey.

Measurements
Soma Surface :  1226.21 μm2
Number of Stems :  1
Number of Bifurcations :  36
Number of Branches :  73
Overall Width :  18.33 μm
Overall Height :  99.75 μm
Overall Depth :  22.16 μm
Average Diameter :  3.76 μm
Total Length :  398.73 μm
Total Surface :  4759.43 μm2
Total Volume :  4673.56 μm3
Max Euclidean Distance :  104.59 μm
Max Path Distance :  145.28 μm
Max Branch Order :  16
Average Contraction :  0.92
Total Fragmentation :  279
Partition Asymmetry :  0.56
Average Rall's Ratio :  1.92
Average Bifurcation Angle Local :  93.06°
Average Bifurcation Angle Remote :  93.87°
Fractal Dimension :  1.06

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website