8.6.82 - Released: 2025-05-21 - Content: 275062 cells
Morphology File (Standardized)
Morphology File (Original)
Log File (Standardized)
Log File (Original)



3D Cell Viewer - Java, legacy
3D Cell Viewer - WebGL, novel
Animation
Similar Neurons
Details about selected cell
NeuroMorpho.Org ID :  NMO_282653
Cell Name :  20160923_BGUG_HuC_ltRFP_d7_F3
Archive Name :  Baier
Species Name :  zebrafish
Strain :  Gal4-s1013tET
Structural Domains :  No Dendrites, Soma, Axon
Physical Integrity :  Axon Complete
Morphological Attributes :  No Diameter, 3D, Angles
Min Age :  5.0 days
Max Age :  7.0 days
Gender :  Male/Female
Min Weight :  Not reported
Max Weight :  Not reported
Development :  larval
Primary Brain Region :  mesencephalon
Secondary Brain Region :  tectum
Tertiary Brain Region :  periventricular layer
Primary Cell Class :  interneuron
Secondary Cell Class :  Not reported
Tertiary Cell Class :  Not reported
Original Format :  neuTube.swc
Experiment Protocol :  in vivo
Experimental Condition :  Control
Staining Method :  photo-activatable green fluorescent protein (pa-GFP)
Slicing Direction :  transverse
Slice Thickness :  0.01  μm
Tissue Shrinkage :  Not reported
Objective Type :  water
Magnification :  20x
Reconstruction Method :  neuTube
Date of Deposition :  2020-11-18
Date of Upload :  2024-04-30
Persistence Vector :  20160923_BGUG_HuC_ltRFP_d7_F3.pvec
Note :  This reconstruction is classified as periventricular interneuron (PVIN) in the original publication.

Reference Article
Related Article Reference :  Retinotectal circuitry of larval zebrafish is adapted to detection and pursuit of prey.

Measurements
Soma Surface :  292.74 μm2
Number of Stems :  1
Number of Bifurcations :  41
Number of Branches :  83
Overall Width :  20 μm
Overall Height :  86.76 μm
Overall Depth :  22.58 μm
Average Diameter :  5.14 μm
Total Length :  481.93 μm
Total Surface :  8106.7 μm2
Total Volume :  11393.3 μm3
Max Euclidean Distance :  92.02 μm
Max Path Distance :  115.62 μm
Max Branch Order :  12
Average Contraction :  0.91
Total Fragmentation :  269
Partition Asymmetry :  0.49
Average Rall's Ratio :  1.97
Average Bifurcation Angle Local :  88.12°
Average Bifurcation Angle Remote :  93.38°
Fractal Dimension :  1.07

© Copyright 2006-2025   George Mason University All Rights Reserved.   Link Graphic to NIF website