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Details about selected cell |
NeuroMorpho.Org ID : | NMO_282975 |
Cell Name : | 20160916_BGUG_HuC_ltRFP_d7_F13 |
Archive Name : | Baier |
Species Name : | zebrafish |
Strain : | Gal4-s1013tET |
Structural Domains : | No Dendrites, No Soma, Axon |
Physical Integrity : | Axon Complete |
Morphological Attributes : | No Diameter, 3D, Angles |
Min Age : | 5.0 days
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Max Age : | 7.0 days
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Gender : |
Male/Female
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Min Weight : | Not reported
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Max Weight : | Not reported
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Development : | larval |
Primary Brain Region : | mesencephalon |
Secondary Brain Region : | tectum |
Tertiary Brain Region : | periventricular layer |
Primary Cell Class : | interneuron |
Secondary Cell Class : | Not reported |
Tertiary Cell Class : | Not reported |
Original Format : | neuTube.swc |
Experiment Protocol : | in vivo |
Experimental Condition : | Control |
Staining Method : | photo-activatable green fluorescent protein (pa-GFP) |
Slicing Direction : | transverse |
Slice Thickness : | 0.01
μm |
Tissue Shrinkage : |
Not reported
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Objective Type : | water |
Magnification : | 20x |
Reconstruction Method : | neuTube |
Date of Deposition : | 2020-11-18 |
Date of Upload : | 2024-04-30 |
Persistence Vector : | 20160916_BGUG_HuC_ltRFP_d7_F13.pvec |
Note : | This reconstruction is classified as periventricular interneuron (PVIN) in the original publication. |
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Reference Article |
Related Article Reference : | Retinotectal circuitry of larval zebrafish is adapted to detection and pursuit of prey. |
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Measurements |
Soma Surface : |
N/A |
Number of Stems : |
1 |
Number of Bifurcations : |
39 |
Number of Branches : |
79 |
Overall Width : |
25.04 μm |
Overall Height : |
49.62 μm |
Overall Depth : |
31.41 μm |
Average Diameter : |
3.51 μm |
Total Length : |
528.64 μm |
Total Surface : |
5917.6 μm2 |
Total Volume : |
5493.46 μm3 |
Max Euclidean Distance : |
60.82 μm |
Max Path Distance : |
104.97 μm |
Max Branch Order : |
15 |
Average Contraction : |
0.92 |
Total Fragmentation : |
225 |
Partition Asymmetry : |
0.48 |
Average Rall's Ratio : |
1.98 |
Average Bifurcation Angle Local : |
89.82° |
Average Bifurcation Angle Remote : |
91.77° |
Fractal Dimension : |
1.06 |
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